Moment based gene set enrichment testing – the npGSEA package
نویسنده
چکیده
2 Example workflow for GSEA 2 2.1 Preparing our gene sets and our dataset for analysis . . . . . . . . . . . . . . . . . . . 2 2.2 Running npGSEA . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 4 2.3 Running npGSEA with the beta and chi-sq approximations . . . . . . . . . . . . . . . . 5 2.4 Adding weights to the model . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 8 2.5 Adding covariates to model . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 9 2.6 Running npGSEA with multiple gene sets . . . . . . . . . . . . . . . . . . . . . . . . . 10
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